STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsI_37577Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. (319 aa)    
Predicted Functional Partners:
OsI_08616
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
 0.917
OsI_31399
Uncharacterized protein.
   
 0.907
OsI_24652
Eukaryotic translation initiation factor 5A.
  
 0.906
OsI_38459
Eukaryotic translation initiation factor 5A.
  
 0.906
OsI_26733
Eukaryotic translation initiation factor 5A.
  
 0.906
OsI_25453
eIF-5a domain-containing protein.
  
 0.906
OsI_25452
eIF-5a domain-containing protein.
  
 0.904
OsI_13610
Uncharacterized protein.
  
 0.904
OsI_34873
Uncharacterized protein.
  
 0.897
OsI_37231
Uncharacterized protein.
  
 0.897
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice
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