Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A0N7KCX2Os01g0347600 protein; Belongs to the peptidase C1 family. (343 aa)    
Predicted Functional Partners:
H0212B02.7
Oryzain alpha chain; Belongs to the peptidase C1 family.
   
 0.900
H0818H01.14
Oryzain beta chain; Probable thiol protease.
   
 0.900
Q6L4X7_ORYSJ
Os05g0508300 protein; Belongs to the peptidase C1 family.
   
 0.900
CP1
Cysteine protease 1; Cysteine protease that may play a role in pollen development. May be regulated by the transcription factor UDT1 in developing anthers and play a role in tapetum development. Positively regulated by the transcription factor TDR in developing anthers and may play a role in tapetum programmed cell death (PCD).
   
 0.900
Q0JE83_ORYSJ
Os04g0311400 protein; Belongs to the peptidase C1 family.
  
0.832
A0A0P0V277
Os01g0347500 protein.
   
 0.807
Q6K7A3_ORYSJ
cDNA clone:J013002F17, full insert sequence; Belongs to the peptidase C1 family.
   
 0.807
Q8GVR2_ORYSJ
cDNA clone:001-115-C06, full insert sequence; Belongs to the peptidase C1 family.
   
 0.807
A0A0P0WCW9
Os04g0521600 protein.
   
 0.742
PDIL5-3
Protein disulfide isomerase-like 5-3; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).
   
 0.742
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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