STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KFL0Os02g0592000 protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (298 aa)    
Predicted Functional Partners:
A0A0P0Y7S8
Os12g0178000 protein.
     
 0.861
Q53NG8_ORYSJ
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.856
Q7XR89_ORYSJ
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.855
Aldh2b
cDNA clone:J013051L04, full insert sequence; Belongs to the aldehyde dehydrogenase family.
     
 0.849
Aldh2a
Mitochondrial aldehyde dehydrogenase ALDH2a; Belongs to the aldehyde dehydrogenase family.
     
 0.843
Q0DZ46_ORYSJ
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.816
Q6H627_ORYSJ
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.816
NIT4
Bifunctional nitrilase/nitrile hydratase NIT4; Highly specific for beta-cyano-L-alanine (Ala(CN)). Low activity with 3-phenylpropionitrile (PPN). Not associated with auxin production but may be involved in cyanide detoxification (By similarity).
   
 
 0.805
Q6H851_ORYSJ
cDNA clone:001-020-C07, full insert sequence.
   
 
 0.805
A0A0P0WS15
Os06g0111600 protein.
     
 0.667
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.