Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KGC8Os02g0823200 protein. (240 aa)    
Predicted Functional Partners:
Q5QMR4_ORYSJ
cDNA clone:J013111E19, full insert sequence.
    
   0.675
Q5VRD8_ORYSJ
Os01g0178200 protein.
    
   0.675
Q6H4Y9_ORYSJ
cDNA clone:J023117G02, full insert sequence.
    
   0.627
Q6K2Z1_ORYSJ
Os02g0306100 protein.
    
   0.627
Q6YZC6_ORYSJ
cDNA clone:J033060E01, full insert sequence.
    
   0.627
Q6YZF6_ORYSJ
cDNA clone:J013062D13, full insert sequence.
    
   0.627
A0A0P0V6N0
Os01g0683600 protein.
    
   0.592
Q5ZCK9_ORYSJ
cDNA clone:J033069O22, full insert sequence; Belongs to the sterol desaturase family.
    
 
 0.572
COLD1
GPCR-type G protein COLD1; Involved in chilling tolerance. Interacts with the G-protein alpha subunit GPA1 to activate the calcium channel for sensing low temperature and to accelerate G-protein GTPase activity.
    
   0.514
A0A0P0WS15
Os06g0111600 protein.
      
 0.469
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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