STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KK58Os05g0150100 protein. (308 aa)    
Predicted Functional Partners:
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.757
A0A0P0XPV0
Os09g0544500 protein.
    
 
 0.733
Q6K7A1_ORYSJ
cDNA clone:J013042H05, full insert sequence.
    
 
 0.733
Q0DY89_ORYSJ
Os02g0708600 protein.
    
 0.649
Q0DY90_ORYSJ
cDNA clone:002-114-G07, full insert sequence.
    
 0.649
A0A0P0XU08
Os10g0372500 protein.
    
 0.608
Q7XDE1_ORYSJ
cDNA clone:002-174-D09, full insert sequence.
    
 0.608
Q5NAK8_ORYSJ
cDNA clone:J033050N08, full insert sequence.
    
 0.605
A0A0P0V1T6
Os01g0314700 protein.
    
 0.585
Q8LRG9_ORYSJ
cDNA clone:J023036C23, full insert sequence.
    
 0.579
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.