STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KLM8Os06g0180000 protein. (324 aa)    
Predicted Functional Partners:
A0A0P0VR14
Os02g0798700 protein.
     
 0.847
Q6ZKM0_ORYSJ
cDNA clone:J013001O15, full insert sequence.
   
 0.775
Q0DIJ1_ORYSJ
cDNA clone:J013056D23, full insert sequence.
  
  
 
0.764
Q5NBG3_ORYSJ
cDNA clone:J013120F01, full insert sequence.
  
  
 
0.764
Q337M1_ORYSJ
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.638
A0A0P0X8Z2
Os07g0608900 protein.
     
 0.625
Q6YTX9_ORYSJ
Os07g0608800 protein.
     
 0.625
Q33B34_ORYSJ
F-box domain containing protein, expressed.
   
 0.594
Q33B36_ORYSJ
cDNA clone:J023054J12, full insert sequence.
   
 0.594
Q657X8_ORYSJ
cDNA clone:J013088I21, full insert sequence.
   
 0.594
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.