Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KNF7Os07g0481600 protein. (212 aa)    
Predicted Functional Partners:
A0A0P0V1T6
Os01g0314700 protein.
    
 0.764
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.658
Q656M9_ORYSJ
Os06g0255200 protein.
   
 0.574
Q8GTK4_ORYSJ
cDNA clone:001-038-B02, full insert sequence.
   
  0.517
BSL1
Serine/threonine-protein phosphatase BSL1 homolog.
    
  0.509
Q53NW5_ORYSJ
Skp1 family, tetramerisation domain containing protein, expressed; Belongs to the SKP1 family.
    
  0.497
A0A0P0WV17
Os06g0237502 protein.
    
 0.490
KIN14I
Kinesin-like protein KIN-14I; Minus-end microtubule-dependent motor protein involved in the regulation of cell division.
   
 0.489
Q943W1_ORYSJ
cDNA clone:001-013-B04, full insert sequence.
    
 0.478
Q8RZZ3_ORYSJ
Serine/threonine-protein phosphatase.
    
  0.469
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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