STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KNG2Os07g0487300 protein. (633 aa)    
Predicted Functional Partners:
A0A0P0V1T6
Os01g0314700 protein.
    
  0.678
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.648
Q6K3D4_ORYSJ
Os02g0281000 protein.
    
 0.564
A0A0P0VAM2
Os01g0857300 protein.
    
  0.509
Q658G8_ORYSJ
cDNA clone:001-131-A02, full insert sequence; Belongs to the AAA ATPase family.
    
 0.504
Q8RUE8_ORYSJ
Putative 3-phosphoinositide-dependent protein kinase-1.
    
  0.504
A0A0P0XU08
Os10g0372500 protein.
    
  0.501
Q7XDE1_ORYSJ
cDNA clone:002-174-D09, full insert sequence.
    
  0.501
Q69TJ6_ORYSJ
Os06g0191500 protein.
  
 
  0.491
Q0D7W9_ORYSJ
Os07g0203700 protein.
    
 
 0.489
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.