Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KPC9Os08g0176200 protein; Belongs to the protein kinase superfamily. (398 aa)    
Predicted Functional Partners:
B7F9R3_ORYSJ
cDNA, clone: J090071I10, full insert sequence.
    
 0.788
Q0DUQ3_ORYSJ
Os03g0173500 protein.
    
 0.788
Q6ATQ8_ORYSJ
Protein phosphatase 2C containing protein, expressed.
    
 0.788
A0A0P0XFK3
Os08g0413000 protein.
    
 0.752
OsCLE508
CLE family OsCLE508 protein.
    
 
 0.712
B7E390_ORYSJ
cDNA clone:001-008-E02, full insert sequence; Belongs to the AAA ATPase family.
    
 0.708
Q10RP0_ORYSJ
Cell division cycle protein 48, putative, expressed.
    
 0.708
Q0DZD2_ORYSJ
cDNA clone:J013157D09, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.696
Q0J947_ORYSJ
Os04g0672600 protein.
    
  0.696
Q6ZGM3_ORYSJ
Os02g0116700 protein.
    
  0.696
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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