STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7KTP8Os12g0192800 protein. (200 aa)    
Predicted Functional Partners:
TRE_ORYSJ
Probable trehalase; Involved in the regulation of trehalose content by hydrolyzing trehalose to glucose; Belongs to the glycosyl hydrolase 37 family.
  
 0.869
C7J2A4_ORYSJ
Os05g0518600 protein.
  
  
 0.758
PMM
Phosphomannomutase; Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
 0.656
Q5JLT1_ORYSJ
cDNA clone:J023048B02, full insert sequence.
  
 0.577
A0A0P0VPT7
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 0.554
A0A0P0W356
Os03g0756700 protein.
  
 0.554
A0A0P0WVQ1
Os06g0286310 protein.
  
 0.554
A0A0P0XFZ1
Os08g0391501 protein.
  
 0.554
AMY1.1
Alpha-amylase; Important for breakdown of endosperm starch during germination; Belongs to the glycosyl hydrolase 13 family.
  
 0.554
AMY1.2
Alpha-amylase isozyme 3A; Important for breakdown of endosperm starch during germination.
  
 0.554
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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