Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0UX97Os01g0120300 protein. (794 aa)    
Predicted Functional Partners:
Q6ZGC2_ORYSJ
Os02g0778200 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.962
A0A0P0VFN6
Os02g0183900 protein.
  
 0.959
Q67WM2_ORYSJ
Os06g0645400 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.959
Q0D8E4_ORYSJ
Os07g0165000 protein.
  
 0.958
Q2QS11_ORYSJ
Bifunctional aminoacyl-tRNA synthetase, putative, expressed.
  
 0.956
Q338J4_ORYSJ
Methionyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.953
Q6K1T2_ORYSJ
Lysine--tRNA ligase.
  
 0.953
P0561B08.33
Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.953
Q6H4P7_ORYSJ
cDNA clone:J013169D12, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.948
Q10Q53_ORYSJ
Methionyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.946
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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