Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0UXN2Os01g0137250 protein; Belongs to the protein kinase superfamily. (383 aa)    
Predicted Functional Partners:
Q6K3D4_ORYSJ
Os02g0281000 protein.
   
  0.842
Q6EP89_ORYSJ
Os02g0676000 protein; Belongs to the membrane-bound acyltransferase family.
     
 0.815
A0A0P0WWU4
Os06g0492000 protein.
   
 0.799
Q6Z717_ORYSJ
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 0.799
Q7XPQ0_ORYSJ
Os04g0625100 protein.
   
 0.799
Q5Z801_ORYSJ
Os06g0712300 protein.
  
 0.753
Q8GVN6_ORYSJ
Os07g0531600 protein.
  
 0.753
A0A0P0W7K1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.733
Q0JEP5_ORYSJ
Os04g0224900 protein.
  
 0.733
A0A0N7KKZ6
Os05g0483801 protein.
    
 0.697
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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