STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0UY51Os01g0124900 protein. (198 aa)    
Predicted Functional Partners:
Q5JLZ9_ORYSJ
cDNA clone:J033086D07, full insert sequence.
    
 0.809
Q5VRV7_ORYSJ
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.645
Q0D730_ORYSJ
cDNA clone:J033048J08, full insert sequence.
    
  0.482
Q0DQD2_ORYSJ
Os03g0607800 protein.
    
  0.482
A0A0P0V6A0
Os01g0658500 protein.
    
 0.418
A0A0P0V9Q4
Os01g0819400 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.418
A0A0P0VP46
Os02g0721500 protein.
    
 0.418
A0A0P0WX41
Os06g0506600 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.418
Q0D571_ORYSJ
cDNA clone:002-175-F03, full insert sequence.
    
 0.418
Q0JI73_ORYSJ
Os01g0819500 protein.
    
 0.418
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.