Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0UZP4Os01g0210200 protein. (195 aa)    
Predicted Functional Partners:
A0A0P0V5Q1
Os01g0637800 protein.
  
   
 0.534
Q6AU56_ORYSJ
Myb-like DNA-binding domain containing protein, expressed.
  
   
 0.525
A0A0P0WYS8
Os06g0605750 protein.
  
     0.523
Q10KS8_ORYSJ
Myb-like DNA-binding domain containing protein.
  
     0.523
Q9LG70_ORYSJ
Os01g0191900 protein.
  
     0.518
A0A0P0W0B3
Os03g0578900 protein.
  
     0.517
Q2QYC1_ORYSJ
Myb-like DNA-binding domain containing protein, expressed.
  
     0.517
Q2RB26_ORYSJ
Myb-like DNA-binding domain containing protein, expressed.
  
     0.517
Q6I634_ORYSJ
Os05g0553400 protein.
  
     0.516
Q69SH8_ORYSJ
cDNA clone:001-206-D11, full insert sequence.
  
     0.515
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.