STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0V0K9Os01g0260500 protein. (778 aa)    
Predicted Functional Partners:
A0A0N7KSI2
Os11g0173700 protein.
  
 
   0.518
Q10EP9_ORYSJ
Serine/threonine-protein kinase 12, putative, expressed; Belongs to the protein kinase superfamily.
   
  0.515
Q5SNH4_ORYSJ
cDNA clone:006-304-B11, full insert sequence; Belongs to the protein kinase superfamily.
   
  0.515
Q0D7F8_ORYSJ
Os07g0251900 protein.
  
 
   0.509
A0A0N7KMA0
Os06g0557400 protein.
  
 
   0.501
A0A0P0VEW7
Os02g0161500 protein.
  
 
   0.494
A0A0P0XVK4
Os10g0468800 protein.
  
 
   0.494
Q657S8_ORYSJ
cDNA clone:J013002E08, full insert sequence.
  
 
   0.492
A0A0P0UZ20
Os01g0161300 protein.
  
 
   0.491
A0A0P0V4W2
Os01g0601700 protein.
  
 
   0.484
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.