STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0V345Os01g0497400 protein. (223 aa)    
Predicted Functional Partners:
A0A0P0XU08
Os10g0372500 protein.
    
 0.694
Q7XDE1_ORYSJ
cDNA clone:002-174-D09, full insert sequence.
    
 0.694
A0A0P0VIN1
Os02g0452500 protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.644
P0001H02.27
Probable protein transport Sec1b; Involved in the vesicle trafficking. Binds syntaxins (By similarity).
    
 0.644
SEC1A_ORYSJ
Probable protein transport Sec1a; Involved in the vesicle trafficking. Binds syntaxins (By similarity).
    
 0.644
Q6Z7I5_ORYSJ
Os02g0329300 protein.
    
 0.619
A0A0P0WM93
Os05g0405400 protein.
   
 0.618
A0A0P0X9W4
Os07g0665300 protein.
   
 0.618
SODCC2
Superoxide dismutase [Cu-Zn] 2; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.
   
 0.618
SODCP
Superoxide dismutase [Cu-Zn], chloroplastic; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.
   
 0.618
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.