Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0V554Os01g0610000 protein. (218 aa)    
Predicted Functional Partners:
Q8RZZ3_ORYSJ
Serine/threonine-protein phosphatase.
   
 
 0.666
A0A0P0WHC1
Os05g0122400 protein.
     
 0.635
Q0DHI3_ORYSJ
Os05g0463900 protein.
     
 0.635
TAP46
PP2A regulatory subunit TAP46; Involved in the regulation of the TOR signaling pathway. Seems to act as a regulator of PP2A catalytic activity.
    
 0.632
Q2RAR3_ORYSJ
TAP42-like family protein, expressed.
    
 0.632
Q0E4T3_ORYSJ
Os02g0101700 protein.
     
 0.599
Q6EPR6_ORYSJ
Serine/threonine-protein phosphatase.
    
 
 0.591
Q84PB4_ORYSJ
Chloroplast photosystem I reaction center subunit II-like protein.
    
   0.564
Q5ZA33_ORYSJ
cDNA clone:J023091P20, full insert sequence.
    
 
 0.561
Q6Z5C5_ORYSJ
cDNA clone:J033121L24, full insert sequence.
    
 0.508
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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