Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0V641 | NCBP | A0A0P0V641 | Q10NQ9 | Os01g0653425 protein. | Eukaryotic translation initiation factor NCBP; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures; Belongs to the eukaryotic initiation factor 4E family. | 0.525 |
A0A0P0V641 | Q2QMC5_ORYSJ | A0A0P0V641 | Q2QMC5 | Os01g0653425 protein. | Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed. | 0.842 |
A0A0P0V641 | Q2QRV3_ORYSJ | A0A0P0V641 | Q2QRV3 | Os01g0653425 protein. | Alpha-dioxygenase, putative, expressed. | 0.444 |
NCBP | A0A0P0V641 | Q10NQ9 | A0A0P0V641 | Eukaryotic translation initiation factor NCBP; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures; Belongs to the eukaryotic initiation factor 4E family. | Os01g0653425 protein. | 0.525 |
Q2QMC5_ORYSJ | A0A0P0V641 | Q2QMC5 | A0A0P0V641 | Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed. | Os01g0653425 protein. | 0.842 |
Q2QRV3_ORYSJ | A0A0P0V641 | Q2QRV3 | A0A0P0V641 | Alpha-dioxygenase, putative, expressed. | Os01g0653425 protein. | 0.444 |