STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0V6V1Os01g0693100 protein. (245 aa)    
Predicted Functional Partners:
C7J1U6_ORYSJ
Os04g0589400 protein.
   
 0.816
A0A0P0XQE9
Os09g0512450 protein.
    
 0.579
Q6K9N9_ORYSJ
cDNA clone:J023012G01, full insert sequence.
    
 0.579
A0A0P0WLY1
Os05g0392000 protein.
   
  0.567
A0A0P0WM13
Os05g0392050 protein.
   
  0.567
A0A0P0V1T6
Os01g0314700 protein.
    
 0.542
Q2R7H8_ORYSJ
TPR Domain containing protein, expressed.
    
 0.532
Q5QLI4_ORYSJ
cDNA clone:002-175-D06, full insert sequence.
    
 0.527
Q5VND0_ORYSJ
cDNA clone:J023002O16, full insert sequence.
    
  0.519
A0A0N7KR07
Os09g0484300 protein.
    
 0.509
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.