STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0V7Z6Os01g0737550 protein. (240 aa)    
Predicted Functional Partners:
Q69V11_ORYSJ
cDNA clone:J013040N20, full insert sequence.
   
 0.928
A0A0P0VMT4
Os02g0672500 protein.
   
 0.900
Q7XSA1_ORYSJ
Os04g0566700 protein.
   
 0.900
Q8GZW5_ORYSJ
Mitochondrial import inner membrane translocase subunit Tim17 family protein, expressed.
   
 0.900
Q9FWD5_ORYSJ
Mitochondrial import inner membrane translocase subunit Tim17 family protein, expressed.
   
 0.900
Q10NZ2_ORYSJ
Os03g0253800 protein.
   
 0.896
A0A0P0V8I5
Os01g0762400 protein.
   
 0.892
Q0DGT4_ORYSJ
Os05g0513200 protein.
   
 0.892
A3AVK8_ORYSJ
Os04g0517000 protein.
   
 0.870
Q69WE3_ORYSJ
Os07g0585800 protein.
   
 
 0.791
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.