Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VB18Os01g0870201 protein. (290 aa)    
Predicted Functional Partners:
Q6Z6K3_ORYSJ
cDNA clone:J023126A08, full insert sequence.
    
 0.999
A0A0P0V6Q8
Os01g0682200 protein.
   
 0.995
A0A0P0Y212
Os11g0479232 protein.
   
 0.994
Q5N714_ORYSJ
Os01g0907300 protein.
   
 0.993
Q67TV0_ORYSJ
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
     
 0.951
A0A0P0VQ96
Os02g0781600 protein.
   
 0.925
Q6ZGZ4_ORYSJ
cDNA clone:J013059O06, full insert sequence.
  
  
 
0.900
A0A0P0XT63
Os10g0200800 protein.
     
 0.864
Q10SA7_ORYSJ
Phospho-ethanolamine N-methyltransferase family protein, expressed.
     
 0.864
Q33AP3_ORYSJ
Phosphatidylinositolglycan class O, putative, expressed.
   
 0.822
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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