Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VB46Os01g0876100 protein; Belongs to the chloride channel (TC 2.A.49) family. (872 aa)    
Predicted Functional Partners:
Q0J5L5_ORYSJ
Os08g0425100 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
  0.810
Q6Z673_ORYSJ
Chloride channel protein.
  
 
 
 0.737
C7IWJ0_ORYSJ
Os01g0704700 protein.
  
 
 
 0.714
Q6ZKN1_ORYSJ
Chloride channel protein.
  
 
 
0.682
Q5N7G9_ORYSJ
cDNA clone:J013066C10, full insert sequence.
      
 0.627
A0A0N7KRJ0
Os10g0185200 protein.
     
  0.624
A0A0P0W360
Os03g0732200 protein.
     
  0.624
Q0DXR0_ORYSJ
Os02g0738900 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
  0.624
Q654U5_ORYSJ
cDNA clone:J033086P03, full insert sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
  0.624
A0A0P0WBS7
Os04g0491200 protein.
      
 0.623
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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