Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A0P0VBK1Os01g0900200 protein. (369 aa)    
Predicted Functional Partners:
PES
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
      
 0.681
PAP3
Probable plastid-lipid-associated protein 3, chloroplastic.
      
 0.623
Q0J1N6_ORYSJ
Os09g0423800 protein.
      
 0.622
Q0J5D4_ORYSJ
cDNA clone:002-115-F07, full insert sequence.
      
 0.622
Q0JB40_ORYSJ
cDNA clone:006-307-C01, full insert sequence.
      
 0.532
Q10FE9_ORYSJ
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
      
 0.494
A0A0P0X6Z4
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.492
A0A0P0VJK2
Os02g0517000 protein.
      
 0.448
Q2QTQ5_ORYSJ
cDNA clone:J023081N23, full insert sequence.
      
 0.448
Q69MT1_ORYSJ
cDNA clone:J023088I03, full insert sequence.
      
 0.415
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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