STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VBV5Os01g0906450 protein. (108 aa)    
Predicted Functional Partners:
A0A0P0VJA4
Os02g0503100 protein; Belongs to the cytochrome P450 family.
      
 0.487
Q67TR6_ORYSJ
Os09g0455500 protein.
      
 0.487
Q6H4B5_ORYSJ
Os09g0275400 protein; Belongs to the cytochrome P450 family.
      
 0.487
Q7XTG5_ORYSJ
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.487
Q8LQ41_ORYSJ
cDNA clone:001-122-A04, full insert sequence.
      
 0.487
Q9XIW9_ORYSJ
cDNA clone:J023029O18, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.469
Q2R1N0_ORYSJ
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.455
Q69UF5_ORYSJ
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.428
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.