Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VC27Os01g0921400 protein. (162 aa)    
Predicted Functional Partners:
Q0JD86_ORYSJ
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
   
 0.877
A0A0P0VQ25
Os02g0749500 protein.
   
 0.854
Q69PQ1_ORYSJ
Os08g0318500 protein.
   
 0.845
SEC10
Exocyst complex component 5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane; Belongs to the SEC10 family.
   
 0.786
P0001H02.27
Probable protein transport Sec1b; Involved in the vesicle trafficking. Binds syntaxins (By similarity).
   
 0.783
Q84SL6_ORYSJ
Os07g0568000 protein.
   
 0.757
Q0DQ78_ORYSJ
Os03g0625700 protein.
   
 0.755
Q53Q77_ORYSJ
cDNA clone:J023029D06, full insert sequence.
   
 0.755
Q6Z1P1_ORYSJ
Os08g0566700 protein.
   
 0.720
Q6Z371_ORYSJ
Os07g0200000 protein.
   
 0.720
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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