Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VCB0Os01g0927200 protein. (176 aa)    
Predicted Functional Partners:
Q6ZKF1_ORYSJ
cDNA clone:J033060O03, full insert sequence.
    
 0.903
A0A0P0V678
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 0.901
Q0JEQ3_ORYSJ
cDNA clone:J013097L24, full insert sequence; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.891
Q7XVC4_ORYSJ
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
    
 0.891
Q6ZGF2_ORYSJ
Os02g0437800 protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.889
Q0JNR7_ORYSJ
Os01g0269100 protein.
    
 0.866
A0A0P0VEA2
Os02g0124700 protein.
    
 0.844
A0A0P0XTA9
Os10g0182300 protein.
    
 0.844
Q5KQK1_ORYSJ
Os05g0180600 protein; Belongs to the PI3/PI4-kinase family.
    
 0.838
Q6UUD9_ORYSJ
Os08g0307400 protein; Belongs to the PI3/PI4-kinase family.
    
 0.838
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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