Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A0P0VCS5Os01g0941500 protein; Belongs to the glycosyl hydrolase 17 family. (347 aa)    
Predicted Functional Partners:
Q5N739_ORYSJ
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
      
 0.618
Q5JMS3_ORYSJ
cDNA clone:001-007-D09, full insert sequence; Belongs to the synaptobrevin family.
    
  0.429
Q5N9F2_ORYSJ
cDNA clone:006-207-F07, full insert sequence; Belongs to the synaptobrevin family.
    
  0.429
C7IWM8_ORYSJ
Os01g0164700 protein.
    
   0.427
A0A0N7KHX3
Os03g0710900 protein.
    
   0.426
A0A0P0YAL3
Phenylalanine ammonia-lyase.
      
 0.415
Q53NW6_ORYSJ
Phenylalanine ammonia-lyase.
      
 0.415
Q6K6Q1_ORYSJ
Phenylalanine ammonia-lyase.
      
 0.415
MHX1
Magnesium/proton exchanger 1; Vacuolar transporter that exchanges protons with Mg(2+), Zn(2+) and Fe(2+) ions. May control the partitioning of Mg(2+) and Zn(2+) between plant organs (By similarity); Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. MHX subfamily.
   
 
 0.400
MHX2
Magnesium/proton exchanger 2; Vacuolar transporter that exchanges protons with Mg(2+), Zn(2+) and Fe(2+) ions. May control the partitioning of Mg(2+) and Zn(2+) between plant organs (By similarity); Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. MHX subfamily.
   
 
 0.400
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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