Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VCX2Os01g0953200 protein; Belongs to the disease resistance NB-LRR family. (917 aa)    
Predicted Functional Partners:
IAA10
Auxin-responsive protein IAA10; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
    
  0.526
Q10EP9_ORYSJ
Serine/threonine-protein kinase 12, putative, expressed; Belongs to the protein kinase superfamily.
   
  0.429
Q5SNH4_ORYSJ
cDNA clone:006-304-B11, full insert sequence; Belongs to the protein kinase superfamily.
   
  0.429
A0A0P0WGA6
Os04g0675101 protein.
   
  0.405
A0A0P0WGK9
Os04g0675200 protein.
   
  0.405
Q0J927_ORYSJ
Os04g0675300 protein.
   
  0.405
Q6H4E3_ORYSJ
cDNA clone:001-122-C02, full insert sequence.
   
  0.405
Q75KG8_ORYSJ
cDNA clone:J033133F19, full insert sequence.
   
  0.405
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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