Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VCZ7Os01g0956400 protein. (81 aa)    
Predicted Functional Partners:
Q69QZ8_ORYSJ
Os02g0798100 protein.
     
 0.518
A0A0P0VBZ2
Os01g0915400 protein.
     
 0.515
A0A0P0VJ70
Os02g0489550 protein.
     
 0.515
SPY
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Probable O-linked N-acetylglucosamine transferase (OGT) involved in various processes such as gibberellin (GA) signaling pathway. OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. Probably acts by adding O-linked sugars to yet unknown proteins (By similarity).
     
 0.515
Q10QM5_ORYSJ
Ras-related protein Rab-6A, putative, expressed.
    
   0.473
Q8H4Q9_ORYSJ
Os07g0496000 protein.
    
   0.473
A0A0P0VQE6
Os02g0786400 protein.
      
 0.457
Q0DRS5_ORYSJ
Os03g0359000 protein.
   
  
 0.415
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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