STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VDW1Os02g0110700 protein. (463 aa)    
Predicted Functional Partners:
ARP5
Actin-related protein 5.
    
 0.838
Q656M9_ORYSJ
Os06g0255200 protein.
   
 0.813
OJ1548_F12.18
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand.
   
 0.808
B7FAF4_ORYSJ
RuvB-like helicase; Belongs to the RuvB family.
   
 0.794
Q5QMH1_ORYSJ
RuvB-like helicase; Belongs to the RuvB family.
    
 0.793
A0A0P0XPV0
Os09g0544500 protein.
    
 0.771
Q6K7A1_ORYSJ
cDNA clone:J013042H05, full insert sequence.
    
 0.771
A0A0N7KIR4
Os04g0274400 protein.
    
 0.762
Q0DY89_ORYSJ
Os02g0708600 protein.
   
 0.757
Q0DY90_ORYSJ
cDNA clone:002-114-G07, full insert sequence.
   
 0.757
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.