Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VEN2Os02g0137400 protein. (858 aa)    
Predicted Functional Partners:
Q6K7Q7_ORYSJ
Os02g0827300 protein.
   
 0.991
Q7XDP6_ORYSJ
Splicing factor 3B subunit 4, putative, expressed.
   
 0.991
Q0DI02_ORYSJ
cDNA clone:001-038-E05, full insert sequence.
   
 0.988
Q7XZG6_ORYSJ
Pre-mRNA branch site p14, putative, expressed.
    
 0.987
Q0JH94_ORYSJ
Os01g0876500 protein.
   
 0.986
A0A0P0Y2V6
Os11g0495400 protein.
   
 0.982
Q7XM15_ORYSJ
cDNA, clone: J075162F09, full insert sequence.
   
 0.982
RH24_ORYSJ
DEAD-box ATP-dependent RNA helicase 24; Belongs to the DEAD box helicase family.
   
 0.974
A0A0P0VEK6
Os02g0142300 protein.
   
 0.973
A0A0P0VEP5
Os02g0147300 protein.
   
 0.973
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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