Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
P58ADnaJ protein P58IPK homolog A; May play a role in protein folding in the endoplasmic reticulum. (476 aa)    
Predicted Functional Partners:
ERDJ3B
DnaJ protein ERDJ3B; May play a role in protein folding in the endoplasmic reticulum.
  
 
0.936
Q6ZFX8_ORYSJ
Os02g0710900 protein.
  
 0.915
A0A0N7KML3
Os06g0679800 protein.
  
 0.837
A0A0P0Y5J2
Os11g0696600 protein.
  
 0.837
Q5KQJ9_ORYSJ
Os05g0181000 protein.
  
 0.837
Q9AQZ5_ORYSJ
70 kDa heat shock protein.
  
 0.837
Q0JBZ7_ORYSJ
Os04g0501000 protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.778
Q94CM9_ORYSJ
Os01g0348700 protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.778
Q7XI55_ORYSJ
Os07g0632600 protein.
   
 0.764
A0A0N7KD20
Os01g0512800 protein.
   
 
 0.746
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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