Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VG47Os02g0198400 protein. (1086 aa)    
Predicted Functional Partners:
Q0JC85_ORYSJ
cDNA clone:001-007-B02, full insert sequence.
   
 0.944
Q8LNH6_ORYSJ
Microtubule-associated EB1 family protein, putative, expressed.
   
 0.938
A0A0P0XIE9
Os08g0531200 protein.
    
 0.936
Q7X6S7_ORYSJ
cDNA, clone: J043006P09, full insert sequence.
   
 0.918
Q6ZC35_ORYSJ
Os08g0468400 protein.
   
 
 0.887
Q0JBZ2_ORYSJ
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
 0.877
A0A0N7KG60
Os02g0770700 protein.
   
 0.860
Q0DWG3_ORYSJ
Os02g0816300 protein.
   
 0.841
Q0JBW0_ORYSJ
Os04g0507500 protein.
   
 0.841
Q6KAI5_ORYSJ
Os02g0617300 protein.
   
 0.841
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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