Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VGP5Os02g0221600 protein. (235 aa)    
Predicted Functional Partners:
Q2R441_ORYSJ
cDNA clone:002-152-C10, full insert sequence.
    
 0.700
A0A0P0V1T6
Os01g0314700 protein.
    
 0.625
A0A0P0VFT9
Os02g0192100 protein.
    
 
 0.621
Q6H5B1_ORYSJ
Os09g0380100 protein.
      
 0.621
Q5ZCM1_ORYSJ
cDNA clone:002-139-F12, full insert sequence.
      
 0.599
A0A0P0VNU0
Os02g0709900 protein.
   
 0.592
A0A0P0VNV1
Os02g0710102 protein.
   
 0.592
Q2QUW8_ORYSJ
cDNA clone:002-184-D06, full insert sequence.
   
 0.584
Q6AT39_ORYSJ
Os05g0559000 protein.
    
 0.584
Q6Z553_ORYSJ
Os08g0414200 protein.
   
 0.584
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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