Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VL75Os02g0596500 protein. (233 aa)    
Predicted Functional Partners:
Q10SX2_ORYSJ
SNF7 family protein, expressed.
   
 0.998
Q69V59_ORYSJ
cDNA clone:006-307-G05, full insert sequence.
   
0.998
CHMP1
ESCRT-related protein CHMP1; Involved in ESCRT-dependent multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF7 family.
   
 0.998
Q2QYF7_ORYSJ
SNF7 family protein, expressed.
   
0.997
Q2RB64_ORYSJ
SNF7 family protein, expressed.
   
0.997
Q5NAE1_ORYSJ
Os01g0286000 protein.
   
 0.995
Q7XHQ7_ORYSJ
cDNA clone:002-150-D10, full insert sequence.
   
 0.995
Q5N773_ORYSJ
cDNA clone:J033043F13, full insert sequence.
    
 0.993
Q94DY4_ORYSJ
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.993
bip109
BRI1-KD interacting protein 109.
   
 0.992
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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