Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VLJ4GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (295 aa)    
Predicted Functional Partners:
Q69V11_ORYSJ
cDNA clone:J013040N20, full insert sequence.
   
 0.916
Q0DJB9_ORYSJ
Os05g0303000 protein.
  
 0.863
Q2QV45_ORYSJ
Stromal 70 kDa heat shock-related protein, chloroplast, putative, expressed; Belongs to the heat shock protein 70 family.
  
 0.863
A3AVK8_ORYSJ
Os04g0517000 protein.
   
 0.814
A0A0P0W7F2
Os04g0211700 protein.
  
 0.808
B9G4B3_ORYSJ
Os09g0491772 protein; Belongs to the heat shock protein 70 family.
  
 0.808
Q10SR3_ORYSJ
Heat shock 70 kDa protein, mitochondrial, putative, expressed; Belongs to the heat shock protein 70 family.
  
 0.808
Q6Z7L1_ORYSJ
Os02g0774300 protein; Belongs to the heat shock protein 70 family.
  
 0.808
A0A0N7KJ39
Os04g0441266 protein.
   
 0.741
coxVb
cDNA clone:J023089B16, full insert sequence.
   
 0.741
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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