Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VM04Os02g0630100 protein. (328 aa)    
Predicted Functional Partners:
A0A0P0WHC1
Os05g0122400 protein.
     
 0.587
Q0DHI3_ORYSJ
Os05g0463900 protein.
     
 0.587
Q0E4T3_ORYSJ
Os02g0101700 protein.
     
  0.583
Q2QN04_ORYSJ
Xanthine/uracil permease family protein, expressed.
      
 0.534
OsCRY2
cDNA clone:J013042O16, full insert sequence.
      
 0.525
Q7FAM9_ORYSJ
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.520
Q6Z5C5_ORYSJ
cDNA clone:J033121L24, full insert sequence.
    
 0.508
Q0JAF3_ORYSJ
Os04g0602200 protein.
     
  0.465
Q7XXS0_ORYSJ
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
   0.460
Q852B9_ORYSJ
cDNA clone:001-032-F02, full insert sequence.
     
 0.444
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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