STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VM78Os02g0632100 protein. (522 aa)    
Predicted Functional Partners:
A0A0P0V1T6
Os01g0314700 protein.
   
  0.680
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.648
Q6K3D4_ORYSJ
Os02g0281000 protein.
    
 0.564
Q8RUE8_ORYSJ
Putative 3-phosphoinositide-dependent protein kinase-1.
  
 
 
0.548
Q69TJ6_ORYSJ
Os06g0191500 protein.
  
 
  0.521
A0A0P0VAM2
Os01g0857300 protein.
    
  0.509
AGO12
Protein argonaute 12; Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity).
   
   0.508
A0A0P0XU08
Os10g0372500 protein.
    
  0.501
Q7XDE1_ORYSJ
cDNA clone:002-174-D09, full insert sequence.
    
  0.501
OsPPCK2L
Phosphoenolpyruvate carboxylase kinase; Belongs to the protein kinase superfamily.
  
 
  0.500
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.