Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
A0A0P0VMP9Os02g0664400 protein. (455 aa)    
Predicted Functional Partners:
Q6K3D4_ORYSJ
Os02g0281000 protein.
   
 0.818
Q656M9_ORYSJ
Os06g0255200 protein.
   
 0.761
A0A0P0V1T6
Os01g0314700 protein.
    
 0.731
A0A0P0V586
Os01g0616333 protein.
    
  0.674
Q0DJZ3_ORYSJ
Os05g0210600 protein.
    
  0.674
Q0JL88_ORYSJ
Os01g0616300 protein.
    
  0.674
C7J1U6_ORYSJ
Os04g0589400 protein.
   
 0.645
Q5W6S2_ORYSJ
Os05g0345500 protein.
    
 0.610
ARP2
Actin-related protein 2; Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament. Regulates the directionality of cell expansion by regulating the actin organization, and thus the microtubules distribution and the fusion of small vacuoles (By similarity).
    
 0.607
Q0JKR7_ORYSJ
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
  0.588
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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