Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VP97Os02g0732800 protein. (372 aa)    
Predicted Functional Partners:
Q5N7U6_ORYSJ
cDNA clone:002-145-C01, full insert sequence; Belongs to the cytochrome P450 family.
   
  
 0.814
prx77
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
  
 0.684
Q7Y168_ORYSJ
Os03g0375200 protein.
      
 0.626
prx126
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
 0.617
A0A0P0VV33
Os03g0235000 protein; Belongs to the peroxidase family.
   
 0.574
Q5NBU0_ORYSJ
Os01g0253900 protein.
      
 0.531
Q6YUI4_ORYSJ
cDNA clone:001-206-G07, full insert sequence.
   
  
 0.530
Q8H7W7_ORYSJ
Cytochrome b561 and DOMON domain-containing protein.
   
  
 0.530
A0A0P0X1L5
Os07g0105000 protein.
   
 
 0.522
Q6Z5B9_ORYSJ
Os07g0542900 protein.
   
 
 0.522
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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