Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VRB2Os02g0805400 protein. (89 aa)    
Predicted Functional Partners:
A0A0P0XQE9
Os09g0512450 protein.
    
 0.800
Q6K9N9_ORYSJ
cDNA clone:J023012G01, full insert sequence.
    
 0.800
Q6ZH84_ORYSJ
cDNA clone:J013072E12, full insert sequence.
    
 0.780
Q7XK43_ORYSJ
Os04g0476800 protein.
    
 0.780
KIN14I
Kinesin-like protein KIN-14I; Minus-end microtubule-dependent motor protein involved in the regulation of cell division.
    
 0.776
Q0DY92_ORYSJ
Os02g0708300 protein.
    
 0.691
Q0JRD5_ORYSJ
cDNA clone:001-025-F02, full insert sequence.
    
 0.691
A0A0P0VQB6
Os02g0782800 protein.
    
 0.684
A0A0P0VQF0
Os02g0784100 protein.
    
 0.684
A0A0P0V586
Os01g0616333 protein.
    
 0.667
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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