Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VRD2Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (491 aa)    
Predicted Functional Partners:
OJ1611_C08.26
Putative D-cysteine desulfhydrase 1, mitochondrial; Catalyzes the production of hydrogen sulfide (H2S) from cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.
  
  
 0.563
49D11.11
cDNA clone:J013151N03, full insert sequence.
      
 0.541
Q8LJ87_ORYSJ
Os01g0356900 protein.
      
 0.532
Q0DXY9_ORYSJ
Os02g0725600 protein.
   
 0.517
Q0D845_ORYSJ
Os07g0185200 protein.
      
 0.479
A0A0P0WZL6
Os06g0660700 protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.478
A0A0P0W9D2
Os04g0379700 protein.
   
    0.405
Q60EH3_ORYSJ
cDNA clone:002-102-A08, full insert sequence.
      
 0.402
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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