Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VRG4Os02g0825433 protein. (287 aa)    
Predicted Functional Partners:
C7J057_ORYSJ
Os03g0860000 protein.
    
 0.603
A0A0N7KCX2
Os01g0347600 protein; Belongs to the peptidase C1 family.
    
 0.596
H0212B02.7
Oryzain alpha chain; Belongs to the peptidase C1 family.
    
 0.596
H0818H01.14
Oryzain beta chain; Probable thiol protease.
    
 0.596
Q6L4X7_ORYSJ
Os05g0508300 protein; Belongs to the peptidase C1 family.
    
 0.596
CP1
Cysteine protease 1; Cysteine protease that may play a role in pollen development. May be regulated by the transcription factor UDT1 in developing anthers and play a role in tapetum development. Positively regulated by the transcription factor TDR in developing anthers and may play a role in tapetum programmed cell death (PCD).
    
 0.596
Q6Z7I5_ORYSJ
Os02g0329300 protein.
    
 0.591
A0A0N7KEF1
Os01g0951000 protein.
   
 
 0.532
B9F3M7_ORYSJ
Os02g0786000 protein.
      
 0.521
P0585B01.16
L-aspartate oxidase, chloroplastic; Catalyzes the oxidation of L-aspartate to iminoaspartate.
      
 0.521
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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