Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VRN2Os02g0826566 protein. (212 aa)    
Predicted Functional Partners:
IDI2
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
    
   0.681
MTK2
Methylthioribose kinase 2; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
    
   0.681
MTK1
Methylthioribose kinase 1; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
    
   0.681
Q6K3D4_ORYSJ
Os02g0281000 protein.
   
  0.607
C7J1U6_ORYSJ
Os04g0589400 protein.
    
  0.597
A0A0P0VGF1
Os02g0213700 protein.
    
   0.588
A0A0P0WSZ7
Os06g0159750 protein.
    
   0.588
A0A0P0X601
Os07g0419200 protein.
    
   0.588
A0A0P0XK19
Os09g0259701 protein.
    
   0.588
Q6K625_ORYSJ
Os02g0612700 protein.
    
   0.588
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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