STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VRQ2Os02g0832400 protein. (941 aa)    
Predicted Functional Partners:
Q5Z4L5_ORYSJ
cDNA clone:J013093K12, full insert sequence.
     
 0.660
A0A0P0V3J9
Os01g0533000 protein.
  
   
 0.561
Q0JKI5_ORYSJ
Os01g0672500 protein.
  
   
 0.523
Q0DF63_ORYSJ
Os06g0112800 protein.
  
    0.508
Q5JLH4_ORYSJ
Os01g0533500 protein.
  
   
 0.506
A0A0P0X182
Os06g0728800 protein.
  
     0.503
A0A0P0VRP0
Os02g0832500 protein.
  
     0.500
Q0DVP5_ORYSJ
Os03g0119500 protein.
  
     0.488
Q0DVI7_ORYSJ
Os03g0128100 protein.
  
     0.480
Q6L5J3_ORYSJ
Os05g0535100 protein; Belongs to the glycosyl hydrolase 17 family.
  
  
  0.466
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.