STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VSF7Os03g0112101 protein. (391 aa)    
Predicted Functional Partners:
Q6ZGX8_ORYSJ
cDNA clone:J033091B08, full insert sequence; Belongs to the adaptor complexes medium subunit family.
   
 0.997
Q2QW51_ORYSJ
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.992
A0A0N7KG12
Os02g0729400 protein.
   
 0.991
A0A0P0V5G8
Os01g0626200 protein.
   
 0.966
Q0DRT9_ORYSJ
Os03g0355600 protein.
   
 0.966
Q0JFL8_ORYSJ
Os01g0973300 protein.
   
 0.966
Q5ZDX7_ORYSJ
cDNA clone:001-207-C03, full insert sequence.
    
 0.964
Q6AV18_ORYSJ
Os05g0383100 protein; Belongs to the adaptor complexes medium subunit family.
   
 0.964
Q9AUZ3_ORYSJ
Adaptin ear-binding coat-associated protein 2, putative, expressed.
    
 0.964
A0A0P0VIS5
Os02g0462401 protein.
   
 0.957
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.