Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VT28Os03g0148900 protein. (210 aa)    
Predicted Functional Partners:
TERT
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme (By similarity).
      
 0.626
Q84SD0_ORYSJ
cDNA clone:002-118-E03, full insert sequence.
      
 0.623
Q6K8D4_ORYSJ
Peptidylprolyl isomerase.
      
 0.541
Q5JLW2_ORYSJ
cDNA clone:J023077N08, full insert sequence.
      
 0.500
Q5Z9H7_ORYSJ
cDNA clone:J023133D21, full insert sequence.
      
 0.491
A0A0P0VL49
Os02g0596700 protein.
      
 0.440
Q7XUP5_ORYSJ
cDNA clone:002-103-B11, full insert sequence.
      
 0.440
P0497A05.15
cDNA clone:J013099J01, full insert sequence.
      
 0.440
SPPL4
Signal peptide peptidase-like 4; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family.
      
 0.416
SPPL5
Signal peptide peptidase-like 5; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family.
      
 0.416
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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