Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VT29Os03g0147900 protein. (123 aa)    
Predicted Functional Partners:
Q7XS59_ORYSJ
cDNA clone:001-103-F08, full insert sequence.
  
  
 
0.993
Q0IRL1_ORYSJ
Signal peptidase I family protein, expressed.
  
 
0.953
A0A0P0Y9Q3
Os12g0438900 protein.
   
 0.930
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.867
B9G505_ORYSJ
Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.
   
 0.842
P0504H10.30
Probable signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum.
   
 0.842
A0A0P0WM72
Os05g0409000 protein.
    
 0.687
A0A0P0Y966
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.680
Q7XUP4_ORYSJ
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.680
Q0DH85_ORYSJ
Os05g0485500 protein.
   
 0.671
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.