Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VTU0Os03g0177966 protein. (175 aa)    
Predicted Functional Partners:
A0A0P0XZW3
Os11g0209700 protein.
    
 
 0.957
Q6Z7I5_ORYSJ
Os02g0329300 protein.
    
 0.877
Q0DL11_ORYSJ
cDNA clone:001-011-C12, full insert sequence.
    
 0.863
Q0IMM4_ORYSJ
Os12g0561200 protein.
    
 0.863
Q6K3D4_ORYSJ
Os02g0281000 protein.
    
 0.856
Q84JS9_ORYSJ
Os07g0595800 protein.
    
 
 0.851
A0A0P0VQB6
Os02g0782800 protein.
    
 0.834
A0A0P0VQF0
Os02g0784100 protein.
    
 0.834
A0A0P0W3I8
Os03g0730800 protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
   
 0.823
Q0DL67_ORYSJ
Os05g0120700 protein.
   
 0.823
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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