STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VWC2Os03g0292900 protein. (315 aa)    
Predicted Functional Partners:
RAN3
GTP-binding nuclear protein Ran-3; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).
    
 
 0.639
RAN1
GTP-binding nuclear protein Ran-1; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).
    
 
 0.639
RAN2
GTP-binding nuclear protein Ran-2; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).
    
 
 0.639
Q8H631_ORYSJ
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
  0.578
A0A0P0XDL4
Os08g0242300 protein.
   
 
 0.480
Q69Y57_ORYSJ
Os06g0192900 protein.
   
 
 0.480
OsJ_16966
Isovaleryl-CoA dehydrogenase, mitochondrial.
   
 
 0.480
Q84M87_ORYSJ
Os03g0858100 protein.
  
 
 0.476
Q0ISA5_ORYSJ
Os11g0543800 protein.
      
 0.467
A0A0P0WVH5
Os06g0274100 protein.
      
 0.465
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.